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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842132.1_cds_XP_016508259.1_21300
CDS Infomation

[gene=LOC107825860] [db_xref=GeneID:107825860] [protein=galacturonokinase-like] [protein_id=XP_016508259.1] [location=join(12050..12088,13149..13262,13590..13661,14305..14348,14790..14943,17255..17320,17679..17758,17843..17942,19580..19755,20128..20168,20256..20284,20609..20678,20769..20858,21191..21435)] [gbkey=CDS]
Sequence

ATGGGTGTTTTTTCTGGTCATTGGCCTTCTGAATCTGAGTTGGATAAATTAAGACAGAAA
GTCGCCGAAATGTCTGGTAGAGATGCTCAAGAGGTCAGGGTGGTTGTATCACCTTACAGG
ATTTGTCCATTGGGGGCTCACATTGATCATCAGGGGGGAACTGTTTCAGCTATGACAATC
AATAGGGGTATACTACTTGGTTTTGTTCCTTCTAATGACACCCAGGTCACATTACAATCT
GGGCAATTTAAAGGTTCGGTTCGGTTCAGAGTAGATGAAGTTCAGCTTCCTAAGCATATC
TCCAAGAAAAATGGTTTAAATGAACAAATTGACTCATCCAAACCTCAGGAAGAATGCAAA
TGGGGTAACTATGCTAGAGGAGCAATATACGCCCTACAAAGCAAAGGAAATCATCTGAAA
ACGGGTATCACTGGGCTTATCTGTGGTTCTGAAGGTCTTGACAGTTCAGGTCTCAGTTCT
TCTGCAGCTGTTGGTATAGCATATCTATTGGCTTTTGAACATGCGAATGATCTTGTAGTT
TGGCCGACAGAAAATATTGAATATGATAGGCTGATTGAAAACGAATATTTAGGTCTGAAA
AATGGCATATTGGATCAGTCGGCAATATTGTTATCAAGCTATGGCTGTTTGACCTGCATG
AATTGCAAGACCATAAAACACAAACTGATACGCCCTCCAGAGGTGCAAAACAATCATGAC
GGAGAGTTAGGTAATGCATACAAGATACTGCTGGCCTTTTCAGGTCTGAAACAAGCATTG
ACAACAAATCCTGGATATAATCGGCGAGTTGCAGAGTGTCAAGAGGCTGCAAAATTATTG
TTGCAAGCTTCAGGGAATGAAGAAGTGGAACCTGTTCTATCAAACGTTGAACCAGAAGTT
TTTGAAGCCCACAAGAGCAAATTAGAACCCGACCTAGCTAAAAGAGCAGAGCACTATTTC
TCTGAAAATGAGAGAGTCCTGAAAGGACTTGAGGCTTGGGCTTCCGGAAACCTTAAAGAA
TTTGGAGAGCTTATTACAGCATCTGGTCTAAGTTCTATTCAAAACTACGAATGTGGTTGT
GAACCACTTATACAGCTATATGAGATTCTTCTGAAGGCTCCTGGTGTACTTGGGGCGCGG
TTTAGTGGTGCAGGATTCCGAGGCTGCTGTCTTGCATTTGTAGATGCAGACCGAGCAGAA
GAAGCAGCAACGTTTGTTAAGAACGAGTACTGTAAGCTCCAGCCCGAGTTGGCAAGTCAT
ATCAACCAAGGGCCGGCTGTATTGATATGTGATGCAGGCGACTGTGCACGCGTGATCTGA

Peptide Sequence

PEP ID

XP_016508259.1
PEP Infomation

PREDICTED: galacturonokinase-like [Nicotiana tabacum]
Sequence

MGVFSGHWPSESELDKLRQKVAEMSGRDAQEVRVVVSPYRICPLGAHIDHQGGTVSAMTI
NRGILLGFVPSNDTQVTLQSGQFKGSVRFRVDEVQLPKHISKKNGLNEQIDSSKPQEECK
WGNYARGAIYALQSKGNHLKTGITGLICGSEGLDSSGLSSSAAVGIAYLLAFEHANDLVV
WPTENIEYDRLIENEYLGLKNGILDQSAILLSSYGCLTCMNCKTIKHKLIRPPEVQNNHD
GELGNAYKILLAFSGLKQALTTNPGYNRRVAECQEAAKLLLQASGNEEVEPVLSNVEPEV
FEAHKSKLEPDLAKRAEHYFSENERVLKGLEAWASGNLKEFGELITASGLSSIQNYECGC
EPLIQLYEILLKAPGVLGARFSGAGFRGCCLAFVDADRAEEAATFVKNEYCKLQPELASH
INQGPAVLICDAGDCARVI

Transcript Sequence

Gene sequence data has not been registered.